Geant4
9.6.p02
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#include <G4GMocrenIO.hh>
Public Member Functions | |
G4GMocrenIO () | |
~G4GMocrenIO () | |
void | initialize () |
void | setFileName (std::string &_filename) |
void | setFileName (char *_filename) |
std::string & | getFileName () |
bool | storeData (char *_filename) |
bool | storeData () |
bool | storeData2 (char *_filename) |
bool | storeData2 () |
bool | storeData3 (char *_filename) |
bool | storeData3 () |
bool | storeData4 (char *_filename) |
bool | storeData4 () |
bool | retrieveData (char *_filename) |
bool | retrieveData () |
bool | retrieveData2 (char *_filename) |
bool | retrieveData2 () |
bool | retrieveData3 (char *_filename) |
bool | retrieveData3 () |
bool | retrieveData4 (char *_filename) |
bool | retrieveData4 () |
std::string & | getID () |
void | setID () |
void | setID (std::string &_id) |
std::string & | getVersion () |
void | setVersion (std::string &_version) |
void | setLittleEndianInput (bool _little) |
void | setLittleEndianOutput (bool _little) |
std::string & | getComment () |
void | setComment (std::string &_comment) |
void | setVoxelSpacing (float _spacing[3]) |
void | getVoxelSpacing (float _spacing[3]) |
int & | getNumberOfEvents () |
void | setNumberOfEvents (int &_numberOfEvents) |
void | addOneEvent () |
void | setPointerToModalityData (unsigned int &_pointer) |
unsigned int | getPointerToModalityData () |
void | addPointerToDoseDistData (unsigned int &_pointer) |
unsigned int | getPointerToDoseDistData (int _elem=0) |
void | setPointerToROIData (unsigned int &_pointer) |
unsigned int | getPointerToROIData () |
void | setPointerToTrackData (unsigned int &_pointer) |
unsigned int | getPointerToTrackData () |
void | getModalityImageSize (int _size[3]) |
void | setModalityImageSize (int _size[3]) |
void | getModalityImageVoxelSpacing (float _size[3]) |
void | setModalityImageVoxelSpacing (float _size[3]) |
void | setModalityImageScale (double &_scale) |
double | getModalityImageScale () |
void | setModalityImage (short *_image) |
short * | getModalityImage (int _z) |
void | clearModalityImage () |
void | setModalityImageDensityMap (std::vector< float > &_map) |
std::vector< float > & | getModalityImageDensityMap () |
void | setModalityImageMinMax (short _minmax[2]) |
void | getModalityImageMinMax (short _minmax[2]) |
short | getModalityImageMax () |
short | getModalityImageMin () |
void | setModalityCenterPosition (float _center[3]) |
void | getModalityCenterPosition (float _center[3]) |
std::string | getModalityImageUnit () |
void | setModalityImageUnit (std::string &_unit) |
short | convertDensityToHU (float &_dens) |
void | newDoseDist () |
int | getNumDoseDist () |
std::string | getDoseDistUnit (int _num=0) |
void | setDoseDistUnit (std::string &_unit, int _num=0) |
void | getDoseDistSize (int _size[3], int _num=0) |
void | setDoseDistSize (int _size[3], int _num=0) |
void | setDoseDistMinMax (short _minmax[2], int _num=0) |
void | getDoseDistMinMax (short _minmax[2], int _num=0) |
void | setDoseDistMinMax (double _minmax[2], int _num=0) |
void | getDoseDistMinMax (double _minmax[2], int _num=0) |
void | setDoseDistScale (double &_scale, int _num=0) |
double | getDoseDistScale (int _num=0) |
void | setShortDoseDist (short *_image, int _num=0) |
void | getShortDoseDist (short *_data, int _z, int _num=0) |
void | getShortDoseDistMinMax (short _minmax[2], int _num=0) |
void | setDoseDist (double *_image, int _num=0) |
double * | getDoseDist (int _z, int _num=0) |
bool | addDoseDist (std::vector< double * > &_image, int _num=0) |
void | getDoseDistCenterPosition (float _center[3], int _num=0) |
void | setDoseDistCenterPosition (float _center[3], int _num=0) |
std::string | getDoseDistName (int _num=0) |
void | setDoseDistName (std::string _name, int _num=0) |
void | copyDoseDist (std::vector< class GMocrenDataPrimitive< double > > &_dose) |
bool | mergeDoseDist (std::vector< class GMocrenDataPrimitive< double > > &_dose) |
void | clearDoseDistAll () |
void | newROI () |
int | getNumROI () |
double | getROIScale (int _num=0) |
void | setROIScale (double &_scale, int _num=0) |
short * | getROI (int _z, int _num=0) |
void | setROI (short *_image, int _num=0) |
void | getROISize (int _size[3], int _num=0) |
void | setROISize (int _size[3], int _num=0) |
void | getROICenterPosition (float _center[3], int _num=0) |
void | setROICenterPosition (float _center[3], int _num=0) |
void | getROIMinMax (short _minmax[2], int _num=0) |
void | setROIMinMax (short _minmax[2], int _num=0) |
void | clearROIAll () |
int | getNumTracks () |
int | getNumTracks4 () |
std::vector< float * > & | getTracks () |
void | getTrack (int _num, std::vector< float * > &_steps, std::vector< unsigned char * > &_color) |
void | addTrack (float *_tracks) |
void | setTracks (std::vector< float * > &_tracks) |
std::vector< unsigned char * > & | getTrackColors () |
void | addTrackColor (unsigned char *_colors) |
void | setTrackColors (std::vector< unsigned char * > &_trackColors) |
void | copyTracks (std::vector< float * > &_tracks, std::vector< unsigned char * > &_colors) |
void | mergeTracks (std::vector< float * > &_tracks, std::vector< unsigned char * > &_colors) |
void | addTrack (std::vector< float * > &_steps, unsigned char _color[3]) |
void | notStoredTracks () |
void | translateTracks (std::vector< float > &_translateo) |
void | clearTracks () |
int | getNumberOfDetectors () |
void | addDetector (std::string &_name, std::vector< float * > &_det, unsigned char _color[3]) |
void | getDetector (int _num, std::vector< float * > &_edges, std::vector< unsigned char * > &_color, std::string &_detectorName) |
void | translateDetector (std::vector< float > &_translate) |
void | clearDetector () |
void | setVerboseLevel (int _level) |
template<typename T > | |
void | convertEndian (char *_val, T &_rval) |
Public Attributes | |
bool | kTracksWillBeStored |
Static Public Attributes | |
static std::string | kId |
static std::string | kVersion = "2.0.0" |
static std::string | kFileName = "dose.gdd" |
static char | kLittleEndianInput = true |
static char | kLittleEndianOutput = true |
static std::string | kComment |
static int | kNumberOfEvents = 0 |
static unsigned int | kPointerToModalityData = 0 |
static std::vector< unsigned int > | kPointerToDoseDistData |
static unsigned int | kPointerToROIData = 0 |
static unsigned int | kPointerToTrackData = 0 |
static unsigned int | kPointerToDetectorData = 0 |
static float | kVoxelSpacing [3] = {0., 0., 0.} |
static class GMocrenDataPrimitive< short > | kModality |
static std::vector< float > | kModalityImageDensityMap |
static std::string | kModalityUnit = "g/cm3 " |
static std::vector< class GMocrenDataPrimitive< double > > | kDose |
static std::string | kDoseUnit = "keV " |
static std::vector< class GMocrenDataPrimitive< short > > | kRoi |
static std::vector< float * > | kSteps |
static std::vector< unsigned char * > | kStepColors |
static std::vector< class GMocrenTrack > | kTracks |
static std::vector< class GMocrenDetector > | kDetectors |
static int | kVerbose = 0 |
Protected Member Functions | |
bool | isDoseEmpty () |
void | calcDoseDistScale () |
bool | isROIEmpty () |
template<typename Type > | |
void | convertEndian (char *, Type &) |
template<typename T > | |
void | invertByteOrder (char *_val, T &_rval) |
Definition at line 166 of file G4GMocrenIO.hh.
G4GMocrenIO::G4GMocrenIO | ( | ) |
Definition at line 401 of file G4GMocrenIO.cc.
G4GMocrenIO::~G4GMocrenIO | ( | ) |
Definition at line 407 of file G4GMocrenIO.cc.
void G4GMocrenIO::addDetector | ( | std::string & | _name, |
std::vector< float * > & | _det, | ||
unsigned char | _color[3] | ||
) |
Definition at line 3947 of file G4GMocrenIO.cc.
bool G4GMocrenIO::addDoseDist | ( | std::vector< double * > & | _image, |
int | _num = 0 |
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void G4GMocrenIO::addOneEvent | ( | ) |
Definition at line 3146 of file G4GMocrenIO.cc.
void G4GMocrenIO::addTrack | ( | float * | _tracks) |
void G4GMocrenIO::addTrack | ( | std::vector< float * > & | _steps, |
unsigned char | _color[3] | ||
) |
void G4GMocrenIO::addTrackColor | ( | unsigned char * | _colors) |
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Definition at line 3727 of file G4GMocrenIO.cc.
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void G4GMocrenIO::clearDoseDistAll | ( | ) |
Definition at line 3706 of file G4GMocrenIO.cc.
void G4GMocrenIO::clearModalityImage | ( | ) |
void G4GMocrenIO::clearROIAll | ( | ) |
Definition at line 3812 of file G4GMocrenIO.cc.
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short G4GMocrenIO::convertDensityToHU | ( | float & | _dens) |
Definition at line 3449 of file G4GMocrenIO.cc.
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void G4GMocrenIO::convertEndian | ( | char * | _val, |
T & | _rval | ||
) |
Definition at line 4005 of file G4GMocrenIO.cc.
void G4GMocrenIO::copyDoseDist | ( | std::vector< class GMocrenDataPrimitive< double > > & | _dose) |
Definition at line 3676 of file G4GMocrenIO.cc.
void G4GMocrenIO::copyTracks | ( | std::vector< float * > & | _tracks, |
std::vector< unsigned char * > & | _colors | ||
) |
Definition at line 3860 of file G4GMocrenIO.cc.
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Definition at line 274 of file G4GMocrenIO.hh.
Definition at line 3655 of file G4GMocrenIO.cc.
std::string G4GMocrenIO::getDoseDistName | ( | int | _num = 0 ) |
Definition at line 3667 of file G4GMocrenIO.cc.
double G4GMocrenIO::getDoseDistScale | ( | int | _num = 0 ) |
Definition at line 3543 of file G4GMocrenIO.cc.
Definition at line 3495 of file G4GMocrenIO.cc.
std::string G4GMocrenIO::getDoseDistUnit | ( | int | _num = 0 ) |
Definition at line 3479 of file G4GMocrenIO.cc.
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Definition at line 240 of file G4GMocrenIO.hh.
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Definition at line 261 of file G4GMocrenIO.hh.
void G4GMocrenIO::getModalityCenterPosition | ( | float | _center[3]) |
short * G4GMocrenIO::getModalityImage | ( | int | _z) |
std::vector< float > & G4GMocrenIO::getModalityImageDensityMap | ( | ) |
Definition at line 3402 of file G4GMocrenIO.cc.
short G4GMocrenIO::getModalityImageMax | ( | ) |
short G4GMocrenIO::getModalityImageMin | ( | ) |
void G4GMocrenIO::getModalityImageMinMax | ( | short | _minmax[2]) |
double G4GMocrenIO::getModalityImageScale | ( | ) |
std::string G4GMocrenIO::getModalityImageUnit | ( | ) |
Definition at line 3442 of file G4GMocrenIO.cc.
void G4GMocrenIO::getModalityImageVoxelSpacing | ( | float | _size[3]) |
int G4GMocrenIO::getNumberOfDetectors | ( | ) |
Definition at line 3944 of file G4GMocrenIO.cc.
int & G4GMocrenIO::getNumberOfEvents | ( | ) |
Definition at line 3140 of file G4GMocrenIO.cc.
int G4GMocrenIO::getNumDoseDist | ( | ) |
int G4GMocrenIO::getNumROI | ( | ) |
int G4GMocrenIO::getNumTracks | ( | ) |
Definition at line 3836 of file G4GMocrenIO.cc.
int G4GMocrenIO::getNumTracks4 | ( | ) |
Definition at line 3839 of file G4GMocrenIO.cc.
Definition at line 3161 of file G4GMocrenIO.cc.
unsigned int G4GMocrenIO::getPointerToModalityData | ( | ) |
Definition at line 3154 of file G4GMocrenIO.cc.
unsigned int G4GMocrenIO::getPointerToROIData | ( | ) |
Definition at line 3173 of file G4GMocrenIO.cc.
unsigned int G4GMocrenIO::getPointerToTrackData | ( | ) |
Definition at line 3180 of file G4GMocrenIO.cc.
double G4GMocrenIO::getROIScale | ( | int | _num = 0 ) |
Definition at line 3579 of file G4GMocrenIO.cc.
std::vector< unsigned char * > & G4GMocrenIO::getTrackColors | ( | ) |
Definition at line 3857 of file G4GMocrenIO.cc.
std::vector< float * > & G4GMocrenIO::getTracks | ( | ) |
Definition at line 3848 of file G4GMocrenIO.cc.
std::string & G4GMocrenIO::getVersion | ( | ) |
Definition at line 3124 of file G4GMocrenIO.cc.
void G4GMocrenIO::getVoxelSpacing | ( | float | _spacing[3]) |
Definition at line 3135 of file G4GMocrenIO.cc.
void G4GMocrenIO::initialize | ( | ) |
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bool G4GMocrenIO::mergeDoseDist | ( | std::vector< class GMocrenDataPrimitive< double > > & | _dose) |
void G4GMocrenIO::mergeTracks | ( | std::vector< float * > & | _tracks, |
std::vector< unsigned char * > & | _colors | ||
) |
void G4GMocrenIO::newDoseDist | ( | ) |
void G4GMocrenIO::newROI | ( | ) |
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Definition at line 437 of file G4GMocrenIO.hh.
bool G4GMocrenIO::retrieveData | ( | char * | _filename) |
bool G4GMocrenIO::retrieveData | ( | ) |
Definition at line 1601 of file G4GMocrenIO.cc.
bool G4GMocrenIO::retrieveData2 | ( | char * | _filename) |
bool G4GMocrenIO::retrieveData2 | ( | ) |
Definition at line 2627 of file G4GMocrenIO.cc.
bool G4GMocrenIO::retrieveData3 | ( | char * | _filename) |
bool G4GMocrenIO::retrieveData3 | ( | ) |
Definition at line 2189 of file G4GMocrenIO.cc.
bool G4GMocrenIO::retrieveData4 | ( | char * | _filename) |
bool G4GMocrenIO::retrieveData4 | ( | ) |
Definition at line 1656 of file G4GMocrenIO.cc.
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Definition at line 3651 of file G4GMocrenIO.cc.
Definition at line 3526 of file G4GMocrenIO.cc.
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Definition at line 237 of file G4GMocrenIO.hh.
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Definition at line 238 of file G4GMocrenIO.hh.
void G4GMocrenIO::setID | ( | ) |
Definition at line 3097 of file G4GMocrenIO.cc.
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Definition at line 263 of file G4GMocrenIO.hh.
void G4GMocrenIO::setLittleEndianInput | ( | bool | _little) |
Definition at line 3128 of file G4GMocrenIO.cc.
void G4GMocrenIO::setLittleEndianOutput | ( | bool | _little) |
Definition at line 3129 of file G4GMocrenIO.cc.
void G4GMocrenIO::setModalityCenterPosition | ( | float | _center[3]) |
void G4GMocrenIO::setModalityImage | ( | short * | _image) |
Definition at line 3386 of file G4GMocrenIO.cc.
void G4GMocrenIO::setModalityImageDensityMap | ( | std::vector< float > & | _map) |
void G4GMocrenIO::setModalityImageMinMax | ( | short | _minmax[2]) |
Definition at line 3406 of file G4GMocrenIO.cc.
void G4GMocrenIO::setModalityImageScale | ( | double & | _scale) |
Definition at line 3370 of file G4GMocrenIO.cc.
void G4GMocrenIO::setModalityImageUnit | ( | std::string & | _unit) |
void G4GMocrenIO::setModalityImageVoxelSpacing | ( | float | _size[3]) |
Definition at line 3143 of file G4GMocrenIO.cc.
Definition at line 3151 of file G4GMocrenIO.cc.
Definition at line 3170 of file G4GMocrenIO.cc.
Definition at line 3177 of file G4GMocrenIO.cc.
Definition at line 3764 of file G4GMocrenIO.cc.
Definition at line 3800 of file G4GMocrenIO.cc.
Definition at line 3788 of file G4GMocrenIO.cc.
Definition at line 3752 of file G4GMocrenIO.cc.
Definition at line 3776 of file G4GMocrenIO.cc.
Definition at line 3560 of file G4GMocrenIO.cc.
void G4GMocrenIO::setTrackColors | ( | std::vector< unsigned char * > & | _trackColors) |
Definition at line 3854 of file G4GMocrenIO.cc.
void G4GMocrenIO::setTracks | ( | std::vector< float * > & | _tracks) |
Definition at line 3845 of file G4GMocrenIO.cc.
Definition at line 4041 of file G4GMocrenIO.cc.
void G4GMocrenIO::setVersion | ( | std::string & | _version) |
Definition at line 3125 of file G4GMocrenIO.cc.
void G4GMocrenIO::setVoxelSpacing | ( | float | _spacing[3]) |
bool G4GMocrenIO::storeData | ( | char * | _filename) |
Definition at line 457 of file G4GMocrenIO.cc.
bool G4GMocrenIO::storeData | ( | ) |
Definition at line 453 of file G4GMocrenIO.cc.
bool G4GMocrenIO::storeData2 | ( | char * | _filename) |
bool G4GMocrenIO::storeData2 | ( | ) |
bool G4GMocrenIO::storeData3 | ( | char * | _filename) |
bool G4GMocrenIO::storeData3 | ( | ) |
bool G4GMocrenIO::storeData4 | ( | char * | _filename) |
bool G4GMocrenIO::storeData4 | ( | ) |
Definition at line 461 of file G4GMocrenIO.cc.
void G4GMocrenIO::translateDetector | ( | std::vector< float > & | _translate) |
void G4GMocrenIO::translateTracks | ( | std::vector< float > & | _translateo) |
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Definition at line 181 of file G4GMocrenIO.hh.
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Definition at line 222 of file G4GMocrenIO.hh.
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Definition at line 207 of file G4GMocrenIO.hh.
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Definition at line 209 of file G4GMocrenIO.hh.
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Definition at line 175 of file G4GMocrenIO.hh.
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Definition at line 169 of file G4GMocrenIO.hh.
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Definition at line 178 of file G4GMocrenIO.hh.
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Definition at line 179 of file G4GMocrenIO.hh.
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Definition at line 201 of file G4GMocrenIO.hh.
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Definition at line 204 of file G4GMocrenIO.hh.
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Definition at line 184 of file G4GMocrenIO.hh.
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Definition at line 195 of file G4GMocrenIO.hh.
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Definition at line 189 of file G4GMocrenIO.hh.
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Definition at line 187 of file G4GMocrenIO.hh.
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Definition at line 191 of file G4GMocrenIO.hh.
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Definition at line 193 of file G4GMocrenIO.hh.
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Definition at line 212 of file G4GMocrenIO.hh.
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Definition at line 216 of file G4GMocrenIO.hh.
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Definition at line 215 of file G4GMocrenIO.hh.
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Definition at line 218 of file G4GMocrenIO.hh.
bool G4GMocrenIO::kTracksWillBeStored |
Definition at line 219 of file G4GMocrenIO.hh.
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Definition at line 225 of file G4GMocrenIO.hh.
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Definition at line 172 of file G4GMocrenIO.hh.
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Definition at line 198 of file G4GMocrenIO.hh.