#include <PDBmolecule.hh>
Collaboration diagram for Molecule:Public Member Functions | |
| Molecule () | |
| First constructor. More... | |
| Molecule (string resName, int mNum) | |
| Second constructor. More... | |
| ~Molecule () | |
| Destructor. More... | |
| Molecule * | GetNext () |
| information about molecule (not implemented) More... | |
| Residue * | GetFirst () |
| Get the first Residue. More... | |
| int | GetID () |
| Get number Molecule. More... | |
| void | SetNext (Molecule *) |
| Set the next Molecule. More... | |
| void | SetFirst (Residue *) |
| Set the first Residue. More... | |
Public Attributes | |
| string | fMolName |
| Molecule name. More... | |
| int | fMolNum |
| Molecule number. More... | |
| double | fMinGlobZ |
| double | fMaxGlobZ |
| double | fMinGlobX |
| double | fMaxGlobX |
| double | fMinGlobY |
| double | fMaxGlobY |
| int | fCenterX |
| "X center" of this Molecule (for rotation...) More... | |
| int | fCenterY |
| "Y center" of this Molecule (for rotation...) More... | |
| int | fCenterZ |
| "Z center" of this Molecule (for rotation...) More... | |
| int | fDistCenterMax |
| dist from center to most away most of the molecule More... | |
| int | fNbResidue |
| Number of residue inside the molecule. More... | |
Private Attributes | |
| Molecule * | fpNext |
| Header of the next Molecule (usage before vector) More... | |
| Residue * | fpFirst |
| Header of the first Residue (usage before vector) More... | |
Detailed Description
Constructor & Destructor Documentation
| Molecule::Molecule | ( | ) |
First constructor.
Definition at line 44 of file PDBmolecule.cc.
| Molecule::Molecule | ( | string | resName, |
| int | mNum | ||
| ) |
|
inline |
Destructor.
Definition at line 70 of file PDBmolecule.hh.
Member Function Documentation
| Residue * Molecule::GetFirst | ( | ) |
Get the first Residue.
Definition at line 82 of file PDBmolecule.cc.
References fpFirst.
Referenced by DetectorConstruction::AtomisticView(), PDBlib::ComputeMatchEdepDNA(), PDBlib::ComputeNbNucleotidsPerStrand(), and PDBlib::ComputeNucleotideBarycenters().
Here is the caller graph for this function:| int Molecule::GetID | ( | ) |
| Molecule * Molecule::GetNext | ( | ) |
information about molecule (not implemented)
Get the next molecule
Definition at line 75 of file PDBmolecule.cc.
References fpNext.
Referenced by DetectorConstruction::AtomisticView(), PDBlib::ComputeBoundingVolumeParams(), PDBlib::ComputeMatchEdepDNA(), PDBlib::ComputeNbNucleotidsPerStrand(), and PDBlib::ComputeNucleotideBarycenters().
Here is the caller graph for this function:| void Molecule::SetFirst | ( | Residue * | resFirst | ) |
Set the first Residue.
Definition at line 103 of file PDBmolecule.cc.
References fpFirst.
Referenced by PDBlib::Load().
Here is the caller graph for this function:| void Molecule::SetNext | ( | Molecule * | moleculeNext | ) |
Set the next Molecule.
Definition at line 96 of file PDBmolecule.cc.
References fpNext.
Referenced by PDBlib::Load().
Here is the caller graph for this function:Member Data Documentation
| int Molecule::fCenterX |
"X center" of this Molecule (for rotation...)
Definition at line 95 of file PDBmolecule.hh.
Referenced by PDBlib::Load(), and Molecule().
| int Molecule::fCenterY |
"Y center" of this Molecule (for rotation...)
Definition at line 96 of file PDBmolecule.hh.
Referenced by PDBlib::Load(), and Molecule().
| int Molecule::fCenterZ |
"Z center" of this Molecule (for rotation...)
Definition at line 97 of file PDBmolecule.hh.
Referenced by PDBlib::Load(), and Molecule().
| int Molecule::fDistCenterMax |
dist from center to most away most of the molecule
Definition at line 98 of file PDBmolecule.hh.
Referenced by Molecule().
| double Molecule::fMaxGlobX |
Definition at line 91 of file PDBmolecule.hh.
Referenced by PDBlib::ComputeBoundingVolumeParams(), PDBlib::Load(), and Molecule().
| double Molecule::fMaxGlobY |
Definition at line 93 of file PDBmolecule.hh.
Referenced by PDBlib::ComputeBoundingVolumeParams(), PDBlib::Load(), and Molecule().
| double Molecule::fMaxGlobZ |
Definition at line 89 of file PDBmolecule.hh.
Referenced by PDBlib::ComputeBoundingVolumeParams(), PDBlib::Load(), and Molecule().
| double Molecule::fMinGlobX |
Definition at line 90 of file PDBmolecule.hh.
Referenced by PDBlib::ComputeBoundingVolumeParams(), PDBlib::Load(), and Molecule().
| double Molecule::fMinGlobY |
Definition at line 92 of file PDBmolecule.hh.
Referenced by PDBlib::ComputeBoundingVolumeParams(), PDBlib::Load(), and Molecule().
| double Molecule::fMinGlobZ |
Definition at line 88 of file PDBmolecule.hh.
Referenced by PDBlib::ComputeBoundingVolumeParams(), PDBlib::Load(), and Molecule().
| string Molecule::fMolName |
| int Molecule::fMolNum |
Molecule number.
Definition at line 86 of file PDBmolecule.hh.
Referenced by GetID(), and Molecule().
| int Molecule::fNbResidue |
Number of residue inside the molecule.
Definition at line 99 of file PDBmolecule.hh.
Referenced by PDBlib::Load(), and Molecule().
|
private |
Header of the first Residue (usage before vector)
Definition at line 103 of file PDBmolecule.hh.
Referenced by GetFirst(), Molecule(), and SetFirst().
|
private |
Header of the next Molecule (usage before vector)
Definition at line 102 of file PDBmolecule.hh.
Referenced by GetNext(), Molecule(), and SetNext().
The documentation for this class was generated from the following files:
- geant4.10.02/examples/extended/medical/dna/pdb4dna/include/PDBmolecule.hh
- geant4.10.02/examples/extended/medical/dna/pdb4dna/src/PDBmolecule.cc
