Given a molecule G4DNAMoleculeEncounterStepper will calculate for its possible reactants what will be the minimum encounter time and the associated molecules. More...

#include <G4DNAMoleculeEncounterStepper.hh>

Inheritance diagram for G4DNAMoleculeEncounterStepper:

Collaboration diagram for G4DNAMoleculeEncounterStepper:

Public Member Functions
	G4DNAMoleculeEncounterStepper ()

virtual	~G4DNAMoleculeEncounterStepper ()

	G4DNAMoleculeEncounterStepper (const G4DNAMoleculeEncounterStepper &)

virtual void	Prepare ()

virtual G4double	CalculateStep (const G4Track &, const G4double &)

void	SetReactionModel (G4VDNAReactionModel *)

G4VDNAReactionModel *	GetReactionModel ()

void	SetVerbose (int)

Public Member Functions inherited from G4VITTimeStepper
	G4VITTimeStepper ()

virtual	~G4VITTimeStepper ()

	G4VITTimeStepper (const G4VITTimeStepper &)

G4VITTimeStepper &	operator= (const G4VITTimeStepper &other)

virtual void	Initialize ()
	This macro defined in AddClone_def. More...

G4TrackVectorHandle	GetReactants ()

virtual void	ResetReactants ()

G4double	GetSampledMinTimeStep ()

void	SetReactionTable (const G4ITReactionTable *)

const G4ITReactionTable *	GetReactionTable ()

Private Member Functions
void	RetrieveResults (const G4Track &, const G4Molecule , const G4Molecule , const G4double, G4KDTreeResultHandle &, G4bool iterate=true)

G4DNAMoleculeEncounterStepper &	operator= (const G4DNAMoleculeEncounterStepper &)

Private Attributes
G4bool	fHasAlreadyReachedNullTime

const G4DNAMolecularReactionTable *&	fMolecularReactionTable

G4VDNAReactionModel *	fReactionModel

G4int	fVerbose

Additional Inherited Members
Static Public Member Functions inherited from G4VITTimeStepper
static void	SetTimes (const G4double &, const G4double &)

Protected Attributes inherited from G4VITTimeStepper
G4double	fSampledMinTimeStep

G4TrackVectorHandle	fReactants

const G4ITReactionTable *	fpReactionTable

Static Protected Attributes inherited from G4VITTimeStepper
static G4ThreadLocal G4double	fCurrentGlobalTime = -1

static G4ThreadLocal G4double	fUserMinTimeStep = -1

Detailed Description

Given a molecule G4DNAMoleculeEncounterStepper will calculate for its possible reactants what will be the minimum encounter time and the associated molecules.

This model includes dynamical time steps as explained in "Computer-Aided Stochastic Modeling of the Radiolysis of Liquid Water", V. Michalik, M. Begusová, E. A. Bigildeev, Radiation Research, Vol. 149, No. 3 (Mar., 1998), pp. 224-236

Definition at line 61 of file G4DNAMoleculeEncounterStepper.hh.

Constructor & Destructor Documentation

G4DNAMoleculeEncounterStepper::G4DNAMoleculeEncounterStepper ( )

Definition at line 47 of file G4DNAMoleculeEncounterStepper.cc.

References fHasAlreadyReachedNullTime, and fVerbose.

G4DNAMoleculeEncounterStepper::~G4DNAMoleculeEncounterStepper ( )

virtual

Definition at line 66 of file G4DNAMoleculeEncounterStepper.cc.

G4DNAMoleculeEncounterStepper::G4DNAMoleculeEncounterStepper ( const G4DNAMoleculeEncounterStepper & right )

Definition at line 69 of file G4DNAMoleculeEncounterStepper.cc.

References fHasAlreadyReachedNullTime, fMolecularReactionTable, fReactionModel, and fVerbose.

Member Function Documentation

G4double G4DNAMoleculeEncounterStepper::CalculateStep	(	const G4Track &	trackA,
		const G4double &	userMinTimeStep
	)

virtual

Implements G4VITTimeStepper.

Definition at line 87 of file G4DNAMoleculeEncounterStepper.cc.

References DBL_MAX, fHasAlreadyReachedNullTime, fMolecularReactionTable, G4VITTimeStepper::fReactants, fReactionModel, G4VITTimeStepper::fSampledMinTimeStep, G4VITTimeStepper::fUserMinTimeStep, fVerbose, G4BestUnit, G4cout, G4endl, GetMolecule(), G4Molecule::GetName(), G4Track::GetTrackID(), and RetrieveResults().

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G4VDNAReactionModel * G4DNAMoleculeEncounterStepper::GetReactionModel ( )

inline

Definition at line 98 of file G4DNAMoleculeEncounterStepper.hh.

References fReactionModel.

G4DNAMoleculeEncounterStepper & G4DNAMoleculeEncounterStepper::operator= ( const G4DNAMoleculeEncounterStepper & rhs )

private

Definition at line 56 of file G4DNAMoleculeEncounterStepper.cc.

References fHasAlreadyReachedNullTime, fMolecularReactionTable, fReactionModel, and fVerbose.

void G4DNAMoleculeEncounterStepper::Prepare ( )

virtual

Reimplemented from G4VITTimeStepper.

Definition at line 79 of file G4DNAMoleculeEncounterStepper.cc.

References G4ITManager< T >::Instance(), and G4VITTimeStepper::Prepare().

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void G4DNAMoleculeEncounterStepper::RetrieveResults	(	const G4Track &	trackA,
		const G4Molecule *	moleculeA,
		const G4Molecule *	moleculeB,
		const G4double	R,
		G4KDTreeResultHandle &	results,
		G4bool	iterate = `true`
	)

private

Definition at line 213 of file G4DNAMoleculeEncounterStepper.cc.

References fAlive, FatalErrorInArgument, fHasAlreadyReachedNullTime, G4VITTimeStepper::fReactants, G4VITTimeStepper::fSampledMinTimeStep, G4VITTimeStepper::fUserMinTimeStep, fVerbose, G4BestUnit, G4cout, G4endl, G4Exception(), G4Molecule::GetDiffusionCoefficient(), G4Track::GetGlobalTime(), GetMolecule(), G4Molecule::GetName(), G4Track::GetPosition(), G4IT::GetTrack(), G4Track::GetTrackID(), and G4Track::GetTrackStatus().

Referenced by CalculateStep().

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void G4DNAMoleculeEncounterStepper::SetReactionModel ( G4VDNAReactionModel * reactionModel )

inline

Definition at line 93 of file G4DNAMoleculeEncounterStepper.hh.

References fReactionModel.

void G4DNAMoleculeEncounterStepper::SetVerbose ( int flag )

inline

Definition at line 103 of file G4DNAMoleculeEncounterStepper.hh.

References fVerbose.

Member Data Documentation

G4bool G4DNAMoleculeEncounterStepper::fHasAlreadyReachedNullTime

private

Definition at line 85 of file G4DNAMoleculeEncounterStepper.hh.

Referenced by CalculateStep(), G4DNAMoleculeEncounterStepper(), operator=(), and RetrieveResults().

const G4DNAMolecularReactionTable*& G4DNAMoleculeEncounterStepper::fMolecularReactionTable

private

Definition at line 88 of file G4DNAMoleculeEncounterStepper.hh.

Referenced by CalculateStep(), G4DNAMoleculeEncounterStepper(), and operator=().

G4VDNAReactionModel* G4DNAMoleculeEncounterStepper::fReactionModel

private

Definition at line 89 of file G4DNAMoleculeEncounterStepper.hh.

Referenced by CalculateStep(), G4DNAMoleculeEncounterStepper(), GetReactionModel(), operator=(), and SetReactionModel().

G4int G4DNAMoleculeEncounterStepper::fVerbose

private

Definition at line 90 of file G4DNAMoleculeEncounterStepper.hh.

Referenced by CalculateStep(), G4DNAMoleculeEncounterStepper(), operator=(), RetrieveResults(), and SetVerbose().

The documentation for this class was generated from the following files:

geant4.10.00.p02/source/processes/electromagnetic/dna/models/include/G4DNAMoleculeEncounterStepper.hh
geant4.10.00.p02/source/processes/electromagnetic/dna/models/src/G4DNAMoleculeEncounterStepper.cc

Public Member Functions

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation