DetectorConstruction.hh

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//
// This example is provided by the Geant4-DNA collaboration
// Any report or published results obtained using the Geant4-DNA software 
// and the DNA geometry given in the Geom_DNA example 
// shall cite the following Geant4-DNA collaboration publications:
// [1] NIM B 298 (2013) 47-54
// [2] Med. Phys. 37 (2010) 4692-4708
// The Geant4-DNA web site is available at http://geant4-dna.org
//
//
#ifndef DetectorConstruction_h
#define DetectorConstruction_h 1

#include "G4VUserDetectorConstruction.hh"
#include "G4VPhysicalVolume.hh"
#include "G4LogicalVolume.hh"
#include "G4Box.hh"
#include "G4Tubs.hh"
#include "G4Ellipsoid.hh"
#include "G4Orb.hh"
#include "G4Trd.hh"
#include "G4Trap.hh"
#include "G4Torus.hh"
#include "G4UnionSolid.hh"
#include "G4Material.hh"
#include "G4NistManager.hh"
#include "G4PVPlacement.hh"
#include "G4UserLimits.hh"
#include "G4VisAttributes.hh"

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....


class DetectorConstruction : public G4VUserDetectorConstruction
{
public:

  DetectorConstruction();

  ~DetectorConstruction();

  G4VPhysicalVolume* Construct();
                         
private:
   
  G4VPhysicalVolume* physiWorld;
  G4LogicalVolume*   logicWorld;
  G4Box*             solidWorld;

  G4VPhysicalVolume* physiTin;
  G4LogicalVolume*   logicTin;
  G4Box*             solidTin;

  G4VPhysicalVolume* physiNucleus;
  G4LogicalVolume*   logicNucleus;
  G4Ellipsoid*       solidNucleus;

  G4Tubs*            solidBoxros;
  G4VPhysicalVolume* physiBox[48];
  G4VPhysicalVolume* physiBoxros[48];
  G4LogicalVolume*   logicBoxros;

  G4RotationMatrix*  rotTrap;
  G4ThreeVector      posTrap;

  G4VPhysicalVolume* physiEnv;
  G4LogicalVolume*   logicEnv;

  G4LogicalVolume*   logicHistone;
  G4Tubs*            solidHistone;

  G4VPhysicalVolume* physiBp1[200];
  G4LogicalVolume*   logicBp1;
  G4Orb*             solidBp1;

  G4VPhysicalVolume* physiBp2[200];
  G4LogicalVolume*   logicBp2;
  G4Orb*             solidBp2;

  G4Orb*             solidSugar1;
  G4Orb*             solidSugar2;
  G4Orb*             solidSugar3;
  G4Orb*             solidSugar4;

  G4LogicalVolume*   logicSphere3;
  G4Orb*             solidSphere3;

  G4LogicalVolume*   logicSphere4;
  G4Orb*             solidSphere4;

  G4UnionSolid* uniDNA;
  G4UnionSolid* uniDNA2;


  G4Material*        waterMaterial;


  void DefineMaterials();
  G4VPhysicalVolume* ConstructDetector();     
  void LoadChromosome(const char* filename, G4VPhysicalVolume* physiBox);
};
#endif